Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSKATFHIGTIIKTHYLFNFFRKQGIVAMTQEEIDQMIEDWISNGFPDELKRLIPDEE
2PL9 Chain:D ((1-19))
------------------------AGVVA-SQDQVDDLLDS---LGF------------
General information:
TITO was launched using:
RESULT:
Template:
2PL9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 330 for 70 contacts (4.7/contact) +
2D Compatibility (PS) -2146 + (NN) -1126 + (LL) 2984
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -2708.0 ( -38.69 by residue)
QMean score : 0.312
(partial model without unconserved sides chains):
PDB file :
Tito_2PL9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PL9-query.scw
PDB file :
Tito_Scwrl_2PL9.pdb
: