Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGPN-LTKKVTDKSNYYKTEVSTVFSTLELSDALGKP--RKVVAVADAGFSKKMRTLMA
2JNB Chain:A ((17-111))
-HLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQS
General information:
TITO was launched using:
RESULT:
Template:
2JNB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42703 for 630 contacts (-67.8/contact) +
2D Compatibility (PS) -10379 + (NN) -7523 + (LL) 208
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -63697.0 ( -101.11 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2JNB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JNB-query.scw
PDB file :
Tito_Scwrl_2JNB.pdb
: