Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHITFDYSKVLGQFVGEHELDYL-----QPQVSAADAFLRQGT---GPGSDFLGWMDLPEN--------------YDKEEFSRIQKAAEKIK---------SDSEVLVVIGIGGSYLGAKAAIDFLNNHFANLQTAEERKAPQILYAGNSISSTYLADLVEYVQDKEFSVNVISKSGTTTEPAIAFRVFKELLVKKYGQEE-ANKRIYATTDKVKGAVKVEADANNWETFVVPDNVGGRFSVLTAVGLLPIAASGAD-ITALMEGANAARKDLSSDKI-SENIAYQYAAVRNVLYR-KGYITEILANYEPSLQYFGEWWKQLAGESEGKDQ----------KGIYPTSANFSTDLHSLGQFIQEGYRNLFETVVRVEKPRKNVTIPE--LTE--DLDGLGYLQGKDV----DFVNKKATDGV----LLAHT--DGGVPNMFVTLPTQDAYTLGYTIYFFELAIGLSGYLNSVNPFDQPGVEAYKRNMFALLGKPGFEELSAELNARL |
| 3LJK Chain:A ((41-521)) | --NIYFDYSKNL---INDYILKSLLESAEKSSLKDKIKQMFNGAKINSTEHRAVLHTALRDLSSTPLIVDGQDIRQEVTKEKQRVKELVEKVVSGRWRGFSGKKITDIVNIGIGGSDLGPKMVVRALQPYH--------CTDLKVHFV-SNVDADSLLQALHVVDPETTLLIIASKSFSTEETLLNSISAREWLLDHYEDEKAVANHFVAISSKL-DKVKEFGID-LEHCYKMWDWVGGRYSLWSSIGMSIAFAIGYDNFEKLLAGAYSVDKHF-KETEFSKNIPVIMALLASYYSCTYNSQSQALLPYDERLCYFVDYLQQADMESNGKSVNIAGETVNYQTGVVLWGGVGTNGQHAFHQLLHQGNIFIPVDFIAIATSHHNYDNHQQALLANCFAQSQALMFGQSYDMVYNELLKSGLNETQAKELAAHKVIPGNRPSTTILLDELSPYSLGALIALYEHKIFVQGVLWDINSYDQWGVELGKKLGKNILKAMNDDSSDEYQNLDD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140636 for 3376 contacts (-41.7/contact) +
2D Compatibility (PS) -45849 + (NN) -27575 + (LL) 888
1D Compatibility (HY) -17200 + (ID) 4950
Total energy: -235322.0 ( -69.70 by residue)
QMean score : 0.417
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