Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
1PP9 Chain:D ((206-232)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKMLLMMGLLLPLVYAMKRHKWSVLKSRKLAYRP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1459 for 101 contacts (-14.4/contact) +
2D Compatibility (PS) -2696 + (NN) 73 + (LL) 10652
1D Compatibility (HY) -4000 + (ID) 250
Total energy: 2320.0 ( 22.97 by residue)
QMean score : 0.277
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