Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKDEMIAKGAKYIQSIYQDPFIQGIIKGRLDHDVICHYLQADNIYLGKFADIYALCLAKSDNLRDKQFFLEQIDFTLNRELADGEGPHQALAAYTNRSYQDIIEKGVWYPSADHYIKHMYFHFYENGIAGALAAMSPCPWIYHQLAKKIIEENQFLNGNPFNNWITFYANDTVEELMENYFRMMDYYAQNLSKEKQADLVDAFVKSCQMRDVFFKWQ
2QZC Chain:A ((6-205))
GNVENLINGVGELWNKYVKHEFILKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDK-VTKILNLVFSS--K----GLETHGKLYSKLDISRDVIVKTG-YNLINYAYTRHLYYYAN-LDWNKFLVAWTPCMFGYSIVGDYVIDS----PNEVYKTWASFYASTEYKKRIEAILYALDEVSI------TEDLLNIFINSVRFEIGFWDAS
General information:
TITO was launched using:
RESULT:
Template:
2QZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125683 for 1564 contacts (-80.4/contact) +
2D Compatibility (PS) -20983 + (NN) -5761 + (LL) 1312
1D Compatibility (HY) -13200 + (ID) 1900
Total energy: -166215.0 ( -106.28 by residue)
QMean score : 0.449
(partial model without unconserved sides chains):
PDB file :
Tito_2QZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QZC-query.scw
PDB file :
Tito_Scwrl_2QZC.pdb
: