Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSVLDYGLIDY---------GKTASDAIQETILLSQEAERLGYHQFWVAEHHGVK------AFSISNPELMIMHLANQTKSIKIGSGGIMPLHYSSFKLAETLKTLETCHPNRVSIGLGNSLGTVKVSNALRS---L-H-K-AHDYEEVLEELKSWLIDK----------------------SSSKE------PL-VQPTLS-SFPDLYVLGSGQKSAYLAAKLGLGFTFGVFPFMDKDPLTEAKKLSSLYYHQFEEYYPNKS-PNLMVAAFVVIADTSEEAENIAKTLDIWM-------LGNKDFNEFATFPTIEEAN---HYQLTPEQKAKIK-S--NRHRMIVGDPKQVKDSLDALVNASQAEELLLIPLVPGLDQRIKSLKLLSQLY |
| 1TVL Chain:A ((7-403)) | IQFGAMIHGVGGTTDGWRHPDVDPSASTNIEFYMKKAQTAEKGLFSFIFIADGLFISEKSIPHFLNRFEPITILSALASVTKNIGLVGT-FSTSFTEPFTISRQLMSLDHISGGRAGWNLVTSPQEG-AARNHSKSNLPEHTERYEIAQEHLDVVRGLWNSWEHDAFIHNKKTGQFFDQAKLHRLNHKGKYFQVEGPLNIGRSKQGEPVVFQAGSSETGRQFAAKNADAIFTHSN---SLE---ETKAFYADVKSRAADEGRDPSSVRIFPGISPIVADTEEEAEKKYREFAELIPIENAVT-------------------EAKARNLTLR---EVAQEMAFPRTLFIGTPERVASLIETWFNAEAADGFIVGSD------IPGTLDAFVEKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132497 for 2338 contacts (-56.7/contact) +
2D Compatibility (PS) -31365 + (NN) -11933 + (LL) 1524
1D Compatibility (HY) -2800 + (ID) 2450
Total energy: -179521.0 ( -76.78 by residue)
QMean score : 0.533
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