Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYQEALEWIHSKLAFGIKPGLERMRWMLEQLGNPQNNLSAIHVVGTNGKGSTTSYLQHIFTNSGYQVGTFTSPYIVDFRERISIDGQMIPESDFIKLVETVRPVVERLHLETNLEPATEFEVITVLMFYYFGNSCPVDIVIIEAGMG--GYYDS-TNMFKALAVTCPSIGLDHQEVLGRTYVDIAEQKVGVLKK---GVPFVYANDRQDVEEVFQIKAKETHSQTYRLHND-----FYIKE----EENYFNYIGP-QANIDHIQLQMPGHHQVSNASIAITTSLLLRDKYPKLTLQTIKDGLE-MTKWVGRTELIF----PNVMI-DGAHNNESVDALVQVIKKYQQKNVHILFAAIN---T---KPIESMLESLSSI-A-PVSVTSFDYPKSINLDKYPKAYTRVSDWKKWLH-DINLT--SDKDFYVITGSLYFISQVRQELLLIKTTTT |
| 1GG4 Chain:A ((86-438)) | -----------------------AFGELAAWVRQQ-VPARVVALTGSSGKTSVKEMTAAILSQCGNTL---YTAGNLN--NDI---GVP----------------------------MTL---------LRLT-P-EYDYAVIELGANHQGEIAWTVSLTRPEAALVNNLA---------SLAGVAKAKGEIFSGLPENGIAIMNADNNDWLNWQ-SVIG--SRKVWRFSPNAANSDFTATNIHVTSHGTE-FTLQTPTGSVDVLLPLPGRHNIANALAAAALSMSV-----GATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYNANVGSMTAAVQVLAEMP-GYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGKQ-SHAIS-TASGV-GEHFADKTALITRLKLLIAEQQVITILVKGSRSAAMEEVVRALQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26962 for 2417 contacts (-11.2/contact) +
2D Compatibility (PS) -30956 + (NN) 6324 + (LL) 7812
1D Compatibility (HY) 17200 + (ID) 1200
Total energy: -27782.0 ( -11.49 by residue)
QMean score : 0.088
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