Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKIANTEVEINIFNL---------LKKLWKKKFLI-------TFVAIAFATAGLFYSLFIVTPQYTSSTRIY-------------------VINPNTPNNSITAQDL------------QAGSFLANDYKEIITSTDVLEKVISSEKLNYPSSQLLQK-----ITVSILKDTRVIS---------------------ISVEDANPKMSQKLANSVREAAVSKIKAVTQVEDITTL-EKGNLPKAPSSPNIKKNVLIGFIV-------------------GAGLSTIVLVIMGILDDRVNTEEDIEKVLGLTSLGIVSDLNKL |
| 3VH3 Chain:A ((4-323)) | MLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSSKQLGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMASSLAVELMTSLLQTKYSGSETTVLGDIPHQIRGFLHNFSILKLETPAYEHCPACSPKVIEAFTDLGWEFVKKALEHPLYLEEISGLSVIKQEVER--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50182 for 1501 contacts (-33.4/contact) +
2D Compatibility (PS) -24152 + (NN) -8336 + (LL) 160
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -93560.0 ( -62.33 by residue)
QMean score : 0.186
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