Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNKGLIATLILLTILVVGELFYNKSEKHLNLSEKQVVKIGILQYV-PHDALDAIEKGVEDGLAQEGYKGKKVKLTVLNAEADQSKIQAMSKQLVNHHNDILIGIATPSAQGLAASTKDTPIIMGAVSDPLGAKLVTNMKKPTTNVTGLSNVVPTKQTVQLIKDITPNVKRIGILYASS-EDNSVSQVTEFTKYAQKAGLEVLKYSV---PSTNEIKTSMSVM--TKKVDAVFVPQDNTIASAFRTVIVAANQ--ANIPVYSSVDTMVE---QGSIASVAQSQYGLGLETAKQAIKVLRGKPVKDVPVKVIDTGKPSLNLKAAKHLGIKIPKKIMKQAEITVKVDD |
| 3CTP Chain:A ((60-305)) | ------------------------------------SKTIGLMVPNISNPFFNQMASVIEEYAKNKGYT-----LFLCNTDDDKEKEKTYLEVLQSHRVAGIIASRSQCEDEYAN--IDIPVVAFENH-IL----------DNIITISSDNYNGGRMAFDHLYEK--GCRKILHIKGPEVFEATELRYKGFLDGARAKDLEIDFIEFQHDFQVKMLEEDINSMKDIVNYDGIFVFNDIAAATVMRALKKRGVSIPQEVQIIGFDNSFIGELLYPSLTTINQPIEALAYTIIELLIKIINGEGVLIEDYIMEVKLIERETTIS------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71035 for 1935 contacts (-36.7/contact) +
2D Compatibility (PS) -25298 + (NN) -9095 + (LL) 5516
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -111262.0 ( -57.50 by residue)
QMean score : 0.460
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