Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYP-AIAIPLKNIEVTCLIEEAPQ-LIAL-DM--------TDP---LSTAIFAALDYL---GKTSSKIAYHIESQVPE---RRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNI--GF------STVP---------------MHLNAYLVIADTGIHGHTKEAVDKVKSSGEAVLPFLKELGYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQLG--VSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALVKEKREAERLSQQLEREGAVNTWTEKV |
| 3GON Chain:A ((1-324)) | ----MIAVKTCGKLYWAGEYAILEPGQLALIKDIPIYM-RAEIAFSDSYRIYSDMFDFAVDLRPNPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTLECDFLVGWTKEVAVSSHMVQQIKQNIN--QNFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQDLQA-VAKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIELLYQERI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128938 for 2369 contacts (-54.4/contact) +
2D Compatibility (PS) -30719 + (NN) -12665 + (LL) 1144
1D Compatibility (HY) -9600 + (ID) 2550
Total energy: -183328.0 ( -77.39 by residue)
QMean score : 0.470
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