Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYEKLLERFLTYVKINTRSNPNSTQTPTTQSQVDFALTVLKPEMEAIGLKDVHYLPSNGYLVGTLPATSDRLCHKIGFISHMDTAD-FNAENITPQIVDYKGGDIELGDSGYILSPKDFPNLNNYHGQTLITTDGKTLLGADDKSGIAEIMTAMEYLASHPEIEHCEIRVGFGPDEEIG-I--GADKFDVK---DFDVDFAYTVDGGPLGELQYETFSAAGLELTFEGRNVHPGTAKNQMINALQLAMDFHSQLPENERPEQ---TDGYQGFYHLYDLSGT------VDQAKSSYIIRDFEEVNFLKRKHLAQDIADNMNEALQSERVKVKLYDQYYNMKKVIEKDMTPINIAKEVMEELDIKPIIEPIRGGTDGSKISFMGIPTPNLFAGGE-NMHGRFEFVSLQTMEKAVDVILGIVAKD |
| 3TX8 Chain:A ((12-369)) | --LGDPIVLTQRLVDIPSPSGQ----------EKQIADE-IEDALRNLNLPGVEVFRFNNNVLARTNRG---LASRVMLAGHIDTVPIAD-----NLPSRV--------------------------EDGIMYGCGT----VDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEPTG-GWIEAGCQGNLRIKVTAHGVRAHSAR-SWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGVANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDGQ----DGIEWAVEDGAGGALP--GLGQQVTSGLIDA---VGR-EKIRAKFGWTDVSRFSAMGIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLSE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TX8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57660 for 2964 contacts (-19.5/contact) +
2D Compatibility (PS) -36331 + (NN) -12109 + (LL) 2624
1D Compatibility (HY) -3600 + (ID) 2650
Total energy: -109726.0 ( -37.02 by residue)
QMean score : 0.431
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