Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITIDKILEILKNDHNFREILFHEHYYYNWTQNVTFNALSYDSRQISSDTLFFAKGATFKKEYLDSAITAGLSFYVSEIDYGADIPVILVNDIKKAMSLISMSFYNNPQNKLKLLAFTGTKGKTTAAYFAYHMLKV-NHRPAML-S-TMNTTLDGKSFFKSHLTTPESLDLFRMMATAVENQMTHLVMEVSSQAYLT-K-R--VYGLTFDVGVFLNISPDHIGPIEHPTFEDYFFHKRLLME---NSNAVVVNSQMDHFNIVKEQVEYIPHDFYGDYSE-NV-ITESQA-FSFHVKGKLENTYDIKLIGKFNQENAIAAGLACLRLGVSIEDIKNGIA-QTTVPGRMEVLTQTNGAKIFVDYAHNGDSLKKLLAVVEEHQKGDIILVLGAPGNKGQSRRKDFGDVINQHPNLQVILTADDPNFEDPLVISQEIASHINRPVTIIIDREEAIANASTLTNCKLDAIIIAGKGADAYQIIKGNRDNYSGDLEVAKKYLKR |
| 3EAG Chain:A ((108-326)) | ---------------------------------------------------------------------------------------------------------------HWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENF-------GVSARLPQ------TPRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHAD--IFADLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGKTAGRVKWDLMGRHNRMNALAVIAAARHVGVDIQTACEALGAFKNVKR--------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114436 for 1661 contacts (-68.9/contact) +
2D Compatibility (PS) -21845 + (NN) -3916 + (LL) 18504
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -127243.0 ( -76.61 by residue)
QMean score : 0.389
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