Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIRKLVVMSDSHGDRDI---VKDIKNHYL--GKVDAIFHNGDSELPSSDP---IW-EGIHVVTGNCDYDSG---------YPEVLVTKIDNTVIVQTHGHLHQINFTWDKLDLLAQQEDADICLYGHLHRADAWKNGKTIFINPGSVLQPRGP---INEKLYAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR
2A22 Chain:A ((5-196))
-FGDLVLLIGDLKIPYGAKELPSNFRE-LLATDKINYVLCTGNVCSQEYVEMLKNITKNVYIVSGDLDSAIFNPDPESNGVFPEYVVVQIGEFKIGLMHGNQVLPWDDPGSLEQWQRRLDCDILVTGHTHKLRVFEKNGKLFLNPGTATGAFSALTPDAPPSFMLMALQGNKVVLYVYDLRDGKTNVAMSEFSK
General information:
TITO was launched using:
RESULT:
Template:
2A22.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78792 for 1390 contacts (-56.7/contact) +
2D Compatibility (PS) -19301 + (NN) -10850 + (LL) 252
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -117841.0 ( -84.78 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_2A22.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A22-query.scw
PDB file :
Tito_Scwrl_2A22.pdb
: