Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILVLHTGGTISMNANE----KGQVMS--SADNPMKYVD-LSLDDLDLTVVDFLNLPSPQITPHHMLDIYHYLKQH--ASNFDGVVITHGTDTLEETAYFLDTMILPKIPIIITGAMRSTNELGSDGVYNYLSALRVANSTKAADKGVLVVMNDEIHAAKYVTKTHTTNVSTFQTPTHGPLGIIMKQDLLFFKATEERV----RFD----LDKITGTVPIVKAYAGMGDSGIISFLNSQNISGLVIEALGAGNMPPKAAQEIEELI-EQGVPVVLVSRCFNGIAEPVYGYEGGGARLQESGVMFVKELNAPKARLKLLIALNAGLTGQNLKDYIEG |
| 1AGX Chain:A ((1-330)) | KNNVVIVATGGTIAGAGASSTNSATYSAAKVPVDALIKAVPQVNDL-ANITGIQALQVASESITDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVVHTDKPIVLVGSMRPSTALSADGPLNLYSAVALASSNEAKNKGVMVLMNDSIFAARDVTKGINIHTHAFVSQ-WGALGTLVEGKPYWFRSSVKKHTNNSEFNIEKIQGDALPGVQIVYGSDNMMPDAYQAFAKAG-VKAIIHAGTGNGSMANYLVPEVRKLHDEQGLQIVRSSRVAQGFVLRNAE-----QPDDKYGWIAAHDLNPQKARLLMALALTKTNDAKEIQNMFWN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AGX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227303 for 2768 contacts (-82.1/contact) +
2D Compatibility (PS) -33728 + (NN) -11360 + (LL) -424
1D Compatibility (HY) -16800 + (ID) 4450
Total energy: -294065.0 ( -106.24 by residue)
QMean score : 0.540
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