Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIEITWTVKYITEFIATAFLIILGNGAVANVDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVLGSFSTISALDDGQKSSRKAAYINGFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLPKQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL |
3D9S Chain:A ((8-226)) | --SVAFLKAVFAEFLATLIFVFFGLGSALKWPS-----ALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGN--------LAVNALNNN-T-------TQGQAMVVELILTFQLALCIFASTDSRRTS--------------------------PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRF-------------SPAHWVFWVGPIVGAVLAAILYFYLLF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -184684 for 1962 contacts (-94.1/contact) +
2D Compatibility (PS) -22632 + (NN) -5414 + (LL) 3000
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -223780.0 ( -114.06 by residue)
QMean score : 0.308
|
|
|