Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVATLIIIRGNSASGKSKIAKQLQAELGENTLLLSQDYLRREMLGTKDGENTTTIPLLINLLN------YGYHNCSYIILEGILRSDW---------------YTPVWKHILKHN---------------------PNNTYAYYYDLSFQETVKRHSTRLKSLEFGEDSLARWWLEKDFLKEIPEKILTKAMSLEDVKKLIMTDVLP----- |
| 1CKE Chain:A ((3-227)) | AIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLAEIKLVPAADALVLDSTTLSIEQVIEKALQYARQKLALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32943 for 1080 contacts (-30.5/contact) +
2D Compatibility (PS) -17673 + (NN) -6895 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 1550
Total energy: -60661.0 ( -56.17 by residue)
QMean score : 0.303
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