Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIFILEDDFVQQAHFEKIIKEIRVQYNLHFKTVETFAKPVQLLESIYEIGLHNLFFLDIEIKNDEQMGLEVAKQIRQVDPYAQIVFVTTHSELMPLTFRYQVSALDYIDKGLSQEEFSQRIEEVLLYVDGICNKPLVENSFYFKSRYSQVQLPFNDLLYIETSSRSHRVVLYTEKDRMEFTATLGDILKQEPRLFQCHRSFLVNPLNIFKVDRIDRLVYFQNGTTCLVSRNKVRDIVSIVDKYQKDRKR |
1KGS Chain:A ((3-120)) | VRVLVVEDERDLADLITEALKKE------MFTVD-VCYDGEEGMYMALN-EPFDVVILDIMLPV--HDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLWVFSDVLRSHIKNLRKKVDKGFKKKIIHTVRGIGYVARDE---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96925 for 934 contacts (-103.8/contact) +
2D Compatibility (PS) -12962 + (NN) -5269 + (LL) 2024
1D Compatibility (HY) -6400 + (ID) 950
Total energy: -120482.0 ( -129.00 by residue)
QMean score : 0.483
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