Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQQYFVNGEAGAYVTIEDKDTIKHMFNVMRLTEDDQVVLVFDDAIKRLAKVVDSSAHRF-QILEELDNNVEMPVQVTIASGFPKGDKLDFVTQKATELGAAAIWGFPADWSVVKWDGKKLAKKEDKLAKIALGAAEQSKRNRLPQVRLFEKKADFQAELAGFDKIFIAYEESAKEGELSALAQNLQTV-KAGDKLLFIFGPEGGISPKEIAAFEEVGAIKVGLGPRIMRTETAPLYALSVISYSAELL |
1V6Z Chain:A ((3-227)) | PHRAFSPG----LTGVLPLRETRHLVEVLRARVGDRFTVFD-GEREALAEVVDLGPPLRYRVLEERRPEREVGVEVVLYVALLKGDKLAEVVRAATELGATRIQPLVTRHSVPKEM---GEGKLRRLRAVALEAAKQSGRVVVPEVLPPI---------PLKAVPQV----AQGLVAHVGATARVREVLDPEKPLALAVGPEGGFAEEEVALLEARGFTPVSLGRRILRAETAALALLALCTAGEGR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4181 for 1729 contacts (-2.4/contact) +
2D Compatibility (PS) -23416 + (NN) 278 + (LL) 1520
1D Compatibility (HY) 2800 + (ID) 2050
Total energy: -25049.0 ( -14.49 by residue)
QMean score : 0.258
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