Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQV-YGEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKI--PSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGMPA------------QGKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
3QO6 Chain:B ((10-330)) | -----------------------------------------------------------KKLQTDELATVRLFQENTPSVV--YITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQG---HIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPKNKLRPIP-VGVSADLLVGQKVFAIGNPFGLDH--TLTTGVISGLRREIS-SAATGRPIQ-DVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSP-----SGASS-----GVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFA-----PDQSVEQLGV-----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVTLEPKPDE-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99690 for 2459 contacts (-40.5/contact) +
2D Compatibility (PS) -33012 + (NN) -8564 + (LL) 4492
1D Compatibility (HY) -26000 + (ID) 5950
Total energy: -168724.0 ( -68.61 by residue)
QMean score : 0.463
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