Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MVNGI--------YTKSFLER--------IQEELPEWQRI-AFELLAETLGDDADTFPCIPGR--QAFLTDQLRIAFAGDPRENRTA--EELAPLLAEYGKISRDT----------GKYASLVVLFDTPEDLAEHYSIEAYEELFWRFLNRLSHQDEKEWPEDIPADPEHYKW---------------------EFCFD---GEPYFILCATPGHEARRSRSFPFFMV----------TFQPRW------------VF---------DDLNGSTAFGRNM---------------SRLIRSRLEAYDQAPIHPQLGWYGGKDNREWKQYFLRDDE-----KQVSKCPFSYL---KNMFNKMK-----------
4IC4 Chain:A ((625-996))KSVTRRNDIPEAAASPPSLLSFLRKNVGKDLSSIAMPVTSNEPISILQLISETF-EYAPLLTKATQRPDPITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPPVFAFFAEHLDWECSYTVTPSQKFWGK---SIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSGRSEGFKVSIIPPPSSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYGFTKFTANLNEITEIEKGNLPPTDSRL-RPDIRAYEEGNVDKAEEWKLKLEQLQRERRNKGQDVEPKYFEKVSKNEWKYITGPKSYWERRKKHDWSDISQLW


General information:
TITO was launched using:
RESULT:

Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1047 -46408 -44.32 -187.13
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -44.32
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.110

(partial model without unconserved sides chains):
PDB file : Tito_4IC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IC4-query.scw
PDB file : Tito_Scwrl_4IC4.pdb: