Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEQKLCQAINLFVEVLLEGTEFVHREINQDVFKH-ISREQADLLKIL--KVKGPTSPGSLAMYQNVHKSAISNRLKKLLEKGLVQWDDCPEKSDRRSKLINITPSGEHILEELDSAIFNALKP-LIDDIDEEHLHSIIEIFTILKSKFKGGDSAE
3ZMD Chain:A ((27-174))--TRWLTDTEQCAWRTHLEVNRLLTHQLEKDLQPFGLTMNDYEILVNLSESEGDRMRMSDLATATMQSKSRLSHQITRMENANLVRRENCE--SDRRGLFAVLTEHGLETMRKVAPHHVASVRRHFIDLLAPEDLTELDKALKPIAEHLRGQ----


General information:
TITO was launched using:
RESULT:

Template: 3ZMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 387 -50959 -131.68 -353.88
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -131.68
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_3ZMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZMD-query.scw
PDB file : Tito_Scwrl_3ZMD.pdb: