Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MNQKGRGLEILINEKQDGQ-WLFSVLKTALKASKPVIQDWMSHQQIKVNHESVLN-NMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLI-INKPAGIATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIV-FAKHRLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRRVSPGGQTAVTHFKVMASNAKERLSLVELELETGRTHQIRVH-LASLGHPLTGDSLYGGGSKLLNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTYFS--- 1KSK Chain:A ((1-234)) ----------------GSHMRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPEHDVAYDGNPLAQ--------------QHGPRYFMLNKPQGYVC-STDDPDHPTVLYFLDEPVAWK-----LHAAGRLDIDTTGLVLMTDDGQWSHRITSP---RHHCEKTYLVTLESPVADD----------TAEQFAKGVQLHNEKDLTKPAVLEVITP----TQVRLTISEGRYHQVK-RMFAAVGNH----------VVELHRERI------------GGITLDADLAPGEYRPLTEEEIASVV

General information: TITO was launched using: RESULT: Template: 1KSK.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 926 -84923 -91.71 -375.77 target 2D structure prediction score : 0.46 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -91.71 2D Compatibility (Sec. Struct. Predict.) : 0.46 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.299

(partial model without unconserved sides chains): PDB file : Tito_1KSK.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1KSK-query.scw PDB file : Tito_Scwrl_1KSK.pdb: