Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKKKVNLGVRDVPTPF-SWVSFSLQHLFAMF----GSTILVPKLV---GMSPAVALVTSGIGTLAYLLITKGQIPAYLGSSFAFISPIILVKATGGPGAAMVGAFLAGLVYGLIALLIRQLGTGWLMKILPPVVVGPVIIVIGLGLASTAVNMAMYADPNASELVYSLKHFSVAGVTLAITIICAIFLRGFLSLIPVLIGIIGGYLFALTQGIVNFQPVLDAKWFAVPEFIIPFKDYSP---SVTLGIAAAMVPVAFVTMSEHIGHQMVLSKVVGQDFIKK--PGLHRSIMGDSVATILASLIGGPPTTTYGENIGVLAITRVFSVFV-------IGGAAVIALCFGFIGKISALISSVPSAVMGGVSFL--LFGIIASSG---------LRMLIDNKIDYENNRNLIITSVILVIGVGGAFIQVSQGGFQVSGMALAAIVGVILNLILPQAKEEQADTSEQHHI-----
2JLN Chain:A ((8-470))EARSLLNPSNAPTRYAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWGINFTVAARMPF-GIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-----GFTNLPLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGG--ENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPRVFTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYLRPIG


General information:
TITO was launched using:
RESULT:

Template: 2JLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2023 -336063 -166.12 -787.03
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -166.12
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_2JLN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JLN-query.scw
PDB file : Tito_Scwrl_2JLN.pdb: