Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLLRFDVIEGRDEKSLQLLLDTAHQAMVEAFGVPERDRYQIVHQHPANELIIQDAGLGFQRTKDMVIISMTSKA-RTESQKEKLYALLAERLEKKCEISPDDLMVSITENGDADWSFGLGEAQFLNGKL
4LHO Chain:D ((1-128))-PLIRIDLTSDRSREQRRAIADAVHDALVEVLAIPARDRFQILTAHDPSDIIAEDAGLGFQRSPSVVIIHVFTQAGRTIETKQRVFAAITESL-APIGVAGSDVFIAITENAPHDWSFGFGSAQYVTGEL


General information:
TITO was launched using:
RESULT:

Template: 4LHO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 501 -50968 -101.73 -401.32
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain D : 0.85

3D Compatibility (PKB) : -101.73
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.610

(partial model without unconserved sides chains):
PDB file : Tito_4LHO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LHO-query.scw
PDB file : Tito_Scwrl_4LHO.pdb: