Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTPTKQHKKETFTHF-IFRVF---------------------MILVGAAS--AAVSIELFLI-------PNDFIDGG----------IIGVSLILDHLFMSNPFLNFAFFVVILNIPFMIFGYKYIGKTFLVSTFIGIVGLAVIESSLHHVEAITTQPILATVFG-GLLLGFGVGLVIRNGGSMDGTE-ILGILLTKK-LPFSVGE----FVMFI---NVFIFIWAVFVFGPEQAMYSFMTYYIAMKTIDAVIQGLDETKA----VIIV-----SEQYDEISDAILHRLGRGTTKLKGKGGYTD-EEKDVIYAV----------VTRLEVTKLKSIVFEVDQNAFITIMNTHETR--GGKFKNAIH--------------------
3FHC Chain:A ((9-405))-IPEREMKDFQFRALKKVRIFDSPEELPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAQKRPFAYHKLLKDAGGMVIDMKWNP----TVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQINWESWLLEDSSRAELPVTDKSDDSLPMGVVVDYTNAPVLMLLSTDGVLCPFYMIN


General information:
TITO was launched using:
RESULT:

Template: 3FHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1396 -120915 -86.62 -419.84
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -86.62
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.162

(partial model without unconserved sides chains):
PDB file : Tito_3FHC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FHC-query.scw
PDB file : Tito_Scwrl_3FHC.pdb: