Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGR--YRGRASALVRPGSAEEVAEVLRVCRDAGAYVTVQGGRTSLVAGT-VPE-HDDVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMAS-TNAGGLRTVRYGNMGEQVVGLDVALPDGTVLRRHSR---------VRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAAL---VDAGRMFRD-VEGIAALELIDGRAAALTR--------EHL------GVR----PPVEADWLLLVELAADHD-QTDRLADLLGGARMCGEPAVGVDAAA-QQRLWRTRESLAEVLGV---Y---------GPPLKFDVSLPL-SAISGFARDAVALVHRHVPDSPEALPLLFGHIGEGNLHLNV--LRCP-P----DREPALYAKMMGLIAECGGNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAAVLFD |
| 1WVF Chain:A ((21-513)) | -VQKFRALLGDDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLS--FSAPSAIAGPVGNTMDRGVGYTPYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQIFKWGYGPTLDGMFT--QANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLRMSNTIPNSVVIASTLWEAGSAHLTRAQYTTEPGHTPDSVIKQMQKDTGMGAWNLYAALYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARGSECKKQAAMAKRVLHKY-----GLDYVAEFIVAPRDMHHVIDVLYDRTNPEETKRADACFNELLDEFEKEGYAV---YRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190336 for 3675 contacts (-51.8/contact) +
2D Compatibility (PS) -46459 + (NN) -11328 + (LL) 108
1D Compatibility (HY) -12000 + (ID) 3750
Total energy: -263765.0 ( -71.77 by residue)
QMean score : 0.400
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