Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPTGTSATTTRPWTPRIATQLSVLACAAFIYVTAEILPVGALSA-IARNLRVSVVLVGTLLSWYALVAAVTTVPLVRWTAHW-PRRRALVVSLVCLTVSQLVSALAP-NFAVLAAGRVLCAVTHGLLWAVIAPIATRLVPPS-HAGRATTSIYIGTSLALVVGSPLTAAMSLM--------WGWRLAAVCVTGAAAAVALAARLALPEMVLRA---DQLE--HVG------------------------------------------RRARHHRNPRLVK---VSVLTMIAVTGHFVSYTYIVVIIRDVVGVR---------GPNLAWLLAAYGVAGLVSVPLVARPLDRWPK-GAVIVGMTGLTAAFTLLTALAFG----ERHTAATALLGTGAIVLWGALATAVSPMLQSAAMRSGGDDPDGASGLYVTAFQIGIMAGALLGGLLYERSLAMMLTASAGLMGVALFGMTVSQHLFENPTLSPGDG |
| 4TPH Chain:A ((14-450)) | ----------------------FMTVSLIELWERFGYYGMQALIVYFMVQRLGFDDSRANLVWSACAALIYVSPAIGGWVGDKILGTKRTMLLGAGILSVGYALMTVPTENTWFMFSALGVIVVGNGLFKPNAGNLVRKIYE--SKIDSAFTIYYMAVNVGSTFSMLLTPWIKDYVNAQYGNEFGWHAAFAVCCVGILVGLGNY-ALMHKSLANYGSEPDTRPVNKKSLAIVLALAALSVVASAIILEYEDVARVFVYAAGVAVLGIFFHL----ERAGLIAALILTVQTVFFFIFYQQMSTSLALFALRNVDWDFQVFGTHLWTWSPAQFQALNPIWIMVLSPVLAW-------IAAKFALGFAVVAIGFFIYGFAGQFAVNGKTSS---WVMIWGYASYSLGELLVSGLGLAMIAR--------MMGAYFVASGISQYLGGVVANFASVP------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -359815 for 2750 contacts (-130.8/contact) +
2D Compatibility (PS) -33461 + (NN) -8053 + (LL) 3076
1D Compatibility (HY) -9200 + (ID) 2000
Total energy: -409453.0 ( -148.89 by residue)
QMean score : 0.228
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