Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYADRDLPGAGGLAVRVIPCLDV---DDGRVV--KGVNFENLRDAGDPVELAAVYDAEGADELTFLDVTASSS---GRATMLEVVRRTAEQVFIPLTVGGGVRTVADVDS-----------LLRAGADKVAVNTAAIACPDLLADM-------------ARQFGSQCIVLSVDARTVPVGSA------------PTPSG-----WEVTTHGGRRGTGMDAVQWAARGADLGVGEILLNSMDADGTKAGFDLALLRAVRAAVTVPVIASGGAGAVEHFAPA-VAAGADAVLAASVFHFRELTIGQVKAALAAEGITVR |
1OX4 Chain:B ((240-551)) | -----------GLTRRIIACLDVRTNDQGDLVVTKGD-------LGKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OX4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75886 for 1997 contacts (-38.0/contact) +
2D Compatibility (PS) -27134 + (NN) -8448 + (LL) 504
1D Compatibility (HY) 8000 + (ID) 1100
Total energy: -104064.0 ( -52.11 by residue)
QMean score : 0.163
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