Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRENLGGVVVRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFANVSNLRTGKLVRIAGVEVGKVTRISINPDATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPGHTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAAVTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAYTNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMYGDFFAFYLCDVVLKVNGKGGQPVYIKLAGQDSGRCAPK |
| 1UUG Chain:A ((5-226)) | --------LTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVF-----NAFRFTELGDVKVVILGQDPYHG----------------------------------PGQAHGLA-----FSVRPGIAIP----PSLLNMYKELENTIPG--FTRPNHGYLESWARQG-----------------------VLLLNTVLTVRAGQAHSHASLGWETFTD--KVISLINQHREGVVFLLW------GSHAQKKGAIIDKQRHHVLKAPH-------------------PSPLS--AHRGFFGCN-HFVLANQWLEQRGETPIDWMPVLPA--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UUG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78253 for 1727 contacts (-45.3/contact) +
2D Compatibility (PS) -23022 + (NN) -5591 + (LL) 7876
1D Compatibility (HY) -4000 + (ID) 2150
Total energy: -105140.0 ( -60.88 by residue)
QMean score : 0.261
|
|
|