Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDTMVTTDVIKSAVQLACRAPSLHNSQPWRWIAEDHTVALFLDKDRVLYATDHSGREALLGCGAVLDHFRVAMAAAGTTANVERFPNPNDPLHLASIDFSPADFVTEGHRLRADAILLRRTDRLPFAEPPDWDLVESQLRTTVT-------ADTVRIDVIA-DDMRPELAAASKLTESLRLYDSSYHAELFWWTGAFETSEGIPHSSLVSAAESDRVTFGRDFPVVANTDRRPEFGHDRSKVLVLSTYDN-------ERASLLRCGEMLSAVLLDATMAGLATCTLTHITELHASRDLVAALIG--QPATPQALVRVGLAPEMEEPPPATPRRPIDEVFHVRAKDHR |
3G14 Chain:A ((2-178)) | --------------------------------------------------------------------------------------------------------------MEFYEVIKKRKSIKK-FEQTAIDRDKLLKIIDMAMRAPSWKNKTPYKFIVVESDKLKLDIANAIENKTS--------------A-----------------A---------------------SEAVLNSPMTIVAVANPEESGDVSGKEIYLIDTAIAMEHIVLGATDEGYGTCWIAAFNE-----NKIKEALKIPDNLRVVALTPLGVPKD---------KKDMDEYLYIDKW--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83997 for 1165 contacts (-72.1/contact) +
2D Compatibility (PS) -16467 + (NN) -11600 + (LL) 10408
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -106856.0 ( -91.72 by residue)
QMean score : 0.289
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