Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSLPGVADLRLGANHPRMWTRRVQGTVVNVGVKVLPWIPTPAKRILSAGRSVIIDGNTLDPTLQLMLSTSRIFGVDGLAVDDDIVASRAHMRAICEAMPGPQIHVDVTDLSIPGPAGEIPARHYRPSGGGATPLLVFYHGGGWTLGDLDTHDALCRLTCRDADIQVLSIDYRLAPEHPAPAAVEDAYAAFVWAHEHASDEFGALPGRVAVGGDSAGGNLSAVVCQLARD---KARYEGGPTPVLQWLLYPRTDFTAQTRSMGLFGNGFLLTKRDIDWFHTQYLRDSDVDPADPRLSPLLAESLSGLAPALIAVAGFDPLRDEGESYAKALRAAGTAVDLRYLGSLTHGFLNLFQLGGGSAAGTNELISALRAHLSRV |
| 3AIN Chain:D ((41-299)) | -------------------------------------------------------------------------------ASVEE----IRSLFKQFSSLTPREEVG-KIEDITIPGSETNIKARVYYPKTQGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-SEKFNGKYG-IAVGGDSAGGNLAAVTAILSKKENIKLKY--------QVLIYPAVSFDLITKSLYDNGEGFFLTREHIDWFGQQYLR-SFADLLDFRFSPILAD-LNDLPPALIITAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNVIHGFVSFF------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134419 for 2265 contacts (-59.3/contact) +
2D Compatibility (PS) -27737 + (NN) -20139 + (LL) 6656
1D Compatibility (HY) -19600 + (ID) 5600
Total energy: -200839.0 ( -88.67 by residue)
QMean score : 0.466
|
|
|