Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MPTSTPSPVFGNQE------------FHYTREDFQQVRERLYRLTGISLAESK----------AQLVYSRLSRRLRLLRLGSFA-EYFTHLDRE----PGEQQLFVNALT--TNLTAFFRE--------RHHFPLLADLAR---RQLQR---HRPLRIWSAAASTGEEPY-------------SIAITLVEALGSFDPPVKIVA------SDIDTGVLDCAR----QGVY------PLERLEQMPAPLKKRF-----FLRGTGPNAGKA---RVVEELRQLVEFRQINLLEADW--------------SIAGEL------DAIFCRNVMIYFDKPTQTRLLER-----MVALLRPE----GLFFAGHSENFVHASHLVRSVGQTVYSPA--------------------------- |
| 4J1Q Chain:A ((20-445)) | HMERLMLEPVWEKQNEELSYTEHIIVLFETERSVTDSIASHMKDARVITLNEAVGHIAERYQCYMQNIFELLQSKVRKLSAGRIIIQAIVPLEKEKQLFAGVSGLFKTAEIEFSKLTAQVIEIEKPEEMIDLHLKLKDDSRRPFDKQIRYEAGYRFVKGWREMVDTLHMPWRDEGVYLITGGAGSLGLLFAKEIANRTGRSTIVLTGRSVLSEDKENELEALRSIGAEVVYREADVSDQHAVRHLLEEIKERYGTLNGIIHGAGSSKDRFIIHKTNEEFQEVLQPKVSGLLHVDECSKDFPLDFFIFFSSVSGCLGNAGQADYAAANSFMDAFAEYRRSLAASKKRFGSTISFNWPLWEEGGMQVGAEDEKRMLKTTGMVPMPTDSGLKAFYQGIVSDKPQVFVMEGQLQKMKQKLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59111 for 1778 contacts (-33.2/contact) +
2D Compatibility (PS) -29754 + (NN) -1595 + (LL) 0
1D Compatibility (HY) -7200 + (ID) 3000
Total energy: -100660.0 ( -56.61 by residue)
QMean score : 0.214
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