Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLS----G-ARWLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLP---GQYANPRALLIRPKVFPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWWNLWFSAIGVDV-EVRPAVLYLSN-DHALARAEEGLGIALANEVLVRQELRSGALVRPLAAE-AALECYQVLTPPGT-PSADVEWFIGWLGEALREEFPDAVTS |
| 3SZP Chain:A ((1-289)) | ------MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFMEKYPDIHIELMMSNQADDLDPTEWDVIFRVGPQRDSSLI---ARKIGEVKDILVASPQYLSSHPQPTHAEELHQHQLLKGYPLLKWQ-LTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHQPEKVRLFIDFVIGYHL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169140 for 1998 contacts (-84.7/contact) +
2D Compatibility (PS) -30280 + (NN) -8207 + (LL) 1232
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -223695.0 ( -111.96 by residue)
QMean score : 0.424
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