Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDVARLLALRSFTELGARQRARALLDAGSFRELLDPFAGVQSPWLERQGIVPQADDGVVVARGLLDGQPAVLAAIEGAFQGGSLGEVSGAKIAGALELAAEDNRNGVPTRALLLLETGGVRLQEANLGLAAIAEIQAAIVDLQRYQPVVAVIAGPVGCFGGMSIAAGLCSY-VLVTREARLGLNGPQVIEQEAGIAEYDSRDRPFIWSLTGGEQRFASGLADAYLADDLDEVRTSVLAYFAKGLPARPRCRRAEDYLRRLGDLDTAEQPDAAGVRRLYQGLGQGDAT
3IAV Chain:B ((45-216))--------------KLTARERIDLLLDEGSFVEL-DEFARHRSTNFGLDANRPYGD-GVVTGYGTVDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFAL---KTGCPV--VGINDSGGARIQEGVASLGAYGEIFRRNTHASGVIPQISLVVGP--CAGGAVYSPAITDFTVMVDQTSHMFITGPDVIKTVTGEDVGFEELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYLPSNNLSEPPAFPEEADLAVTDEDAELDTIVPDSANQPYDMHSVIEHVLDDA


General information:
TITO was launched using:
RESULT:

Template: 3IAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91235 for 1373 contacts (-66.4/contact) +
2D Compatibility (PS) -19361 + (NN) -9869 + (LL) 1860
1D Compatibility (HY) -8000 + (ID) 2950
Total energy: -129555.0 ( -94.36 by residue)
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_3IAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IAV-query.scw
PDB file : Tito_Scwrl_3IAV.pdb: