Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKLRGMFSSDLSIDLGTANTLIYVRERGI---------VLNEPSVVAIRSHGSQKSVVAVGTEAKRMLGRTPGNIAA--IRPMK-----------------------------------DGVIADFSVCEKMLQYFINKVHENSFLQPSPRVLICVPCKSTQVERRAIRESALGAGAREVFLIEEPMAAAIGAGLPV-EEARGSMVVDIGGGTTEIALISLNGVVY-----AESVRVGGDRFDEAIVTYVRRNYGSLIG-------------ESTAERIKQEIGTAFPGGDVREVDVRGRNLAEGVPRSFTLNSNEVLEALQESLATIVQAVKSALEQSPPELASDIAERGLVLTGGGALLRDLDKLLAQETG-LPVIVAEEPLTCVARGGGRALEMMDRHSMDLLSTE |
| 3QFU Chain:A ((16-393)) | -------NYGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-----ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDY-LGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMST----RIEI--DSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLE--KKDV-DDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158451 for 2618 contacts (-60.5/contact) +
2D Compatibility (PS) -33378 + (NN) -11122 + (LL) 1548
1D Compatibility (HY) -8800 + (ID) 3550
Total energy: -213753.0 ( -81.65 by residue)
QMean score : 0.479
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