Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRYIAFANSPVGRRLVGAVGLPSPLRLERWQAGRVRPVDGPLVIGGSGALAEAVLPFAGKLTDAVFAAVDGQFELPRWTAEHSPRAKAVLFDASGLTRFEQLVALRDFFQPVLKGLDKCPKVVVLGRPPESLKDPVTASVQRSLEGFTRSLGKEIRRGGNVQLLYVGKGAEDQLEGALRFFLSPKSAYVSGQVIRLAANSAQVHDWSKPLAGQRALVTGAARGIGAAIAETLARDGAEVVLLDVPPAREALEGLAARLG--GRAVALDICAADAGQQLVEALPE---GVDIVVHNAGITRDKTLAKMSSDFWNSVINVNLNAPQVLTQALLDGGKLHDNGRVVLLASISGIAGNLGQSNYAVSKAGLIGLAQAWAPALGKRGITINAVAPGFIETQMTAAIPLTIREAGRRMNSMSQGGLPQDVAETVAWFAQPSSGAVSGQVLRVCGQSLLGA |
| 4WK6 Chain:B ((10-246)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LEGKVALVTGASRGIGKAIAELLAERGAKVI--GTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVASVVGTM----QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNG------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -143418 for 1906 contacts (-75.2/contact) +
2D Compatibility (PS) -24365 + (NN) -3072 + (LL) 13588
1D Compatibility (HY) -14800 + (ID) 4550
Total energy: -176617.0 ( -92.66 by residue)
QMean score : 0.525
|
|
|