Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC
1FXF Chain:B ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
1FXF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66678 for 925 contacts (-72.1/contact) +
2D Compatibility (PS) -12936 + (NN) -6870 + (LL) 2372
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -104412.0 ( -112.88 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1FXF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FXF-query.scw
PDB file :
Tito_Scwrl_1FXF.pdb
: