Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NLYQFKNMIKCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISGCWPYFKTYSYECSQGTLTCKGDNNACAASVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ
1Y75 Chain:A ((1-117))
NTYQFRNMIQCTVPSRSWWDFADYGCYCG-CGSGTPVDDLDRCCQVHCNCYRQAGEISGCRPKFKTYTYECSGGTLTCKGDNNACAASSCDCDRLAAICFAGAPYNDNNYNIDLKARC-
General information:
TITO was launched using:
RESULT:
Template:
1Y75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72550 for 874 contacts (-83.0/contact) +
2D Compatibility (PS) -12546 + (NN) -6259 + (LL) 220
1D Compatibility (HY) -14400 + (ID) 5150
Total energy: -110685.0 ( -126.64 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1Y75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y75-query.scw
PDB file :
Tito_Scwrl_1Y75.pdb
: