Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHSKRTYCPDWDDKDWDYGKWRSSSSHKRRKRSHSSAQENKRCKYNHSKMCDSHYLESRSINEKDYHSRRYIDEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSHRRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR--DER-----TLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTR---KRKYFHHDR--LDWDEHSSAGRYV--SRRCKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI |
| 3LLT Chain:A ((20-360)) | -----------------------------------------------------------------------------------------------------------------------------------------------DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN-NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK-SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKII-----KHELFCDFLYSILQIDPTLRPSPAELLKHKFLE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LLT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -221544 for 2604 contacts (-85.1/contact) +
2D Compatibility (PS) -35086 + (NN) -10479 + (LL) 6420
1D Compatibility (HY) -32400 + (ID) 6050
Total energy: -299139.0 ( -114.88 by residue)
QMean score : 0.348
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