Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKPNVAIIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENKIIDDNIIHASSIESSLNLVSDVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKFPLESWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTRK
4H97 Chain:B ((1-190))
--KPNVAIIVAALKPALGIGYKGKMPWRLRKEIRYFKDVTTRTTKPNTRNAVIMGRKTWESIPQKFRPLPDRLNIILSRSYENEIIDDNIIHASSIESSLNLVSDVERVFIIGGAEIYNELINNSLVSHLLITEIEHPSPESIEMDTFLKFPLESWTKQPKSELQKFVGDTVLEDDIKEGDFTYNYTLWTRK
General information:
TITO was launched using:
RESULT:
Template:
4H97.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157033 for 1429 contacts (-109.9/contact) +
2D Compatibility (PS) -20258 + (NN) -3921 + (LL) 180
1D Compatibility (HY) -27200 + (ID) 9450
Total energy: -217682.0 ( -152.33 by residue)
QMean score : 0.763
(partial model without unconserved sides chains):
PDB file :
Tito_4H97.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H97-query.scw
PDB file :
Tito_Scwrl_4H97.pdb
: