Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
1S3Y Chain:A ((1-206))
MNQQKSLTLIVALTTSYGIGRSNSLPWKLKKEISYFKRVTSFVPTFDSFESMNVVLMGRKTWESIPLQFRPLKGRINVVITRNESLDLGNGIHSAKSLDHALELLYRTYGSESSVQINRIFVIGGAQLYKAAMDHPKLDRIMATIIYKDIHCDVFFPLKFRDKEWSSVWKKEKHSDLESWVGTKVPHGKINEDGFDYEFEMWTRDL
General information:
TITO was launched using:
RESULT:
Template:
1S3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136870 for 1513 contacts (-90.5/contact) +
2D Compatibility (PS) -22334 + (NN) -8720 + (LL) 0
1D Compatibility (HY) -31200 + (ID) 10300
Total energy: -209424.0 ( -138.42 by residue)
QMean score : 0.766
(partial model without unconserved sides chains):
PDB file :
Tito_1S3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3Y-query.scw
PDB file :
Tito_Scwrl_1S3Y.pdb
: