Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRSRRVDVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFRGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLLNP
4O11 Chain:B ((7-226))
------DVMDVMNRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAEFRKRFGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPSTRPERLSRLREIIGQDSFLISPGVGAQGGDPGETLRFADAIIVGRSIYLADNPAAAAAGIIESIKDLL--
General information:
TITO was launched using:
RESULT:
Template:
4O11.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -184691 for 1930 contacts (-95.7/contact) +
2D Compatibility (PS) -23651 + (NN) -6017 + (LL) 452
1D Compatibility (HY) -32000 + (ID) 10950
Total energy: -256857.0 ( -133.09 by residue)
QMean score : 0.850
(partial model without unconserved sides chains):
PDB file :
Tito_4O11.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O11-query.scw
PDB file :
Tito_Scwrl_4O11.pdb
: