Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
1ZCN Chain:A ((7-161))
------LPPGWEKRMS--NGRVYYFNHITNASQWERPS------------EPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
General information:
TITO was launched using:
RESULT:
Template:
1ZCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24600 for 1108 contacts (-22.2/contact) +
2D Compatibility (PS) -15434 + (NN) -10090 + (LL) -300
1D Compatibility (HY) -15600 + (ID) 7100
Total energy: -73124.0 ( -66.00 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_1ZCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZCN-query.scw
PDB file :
Tito_Scwrl_1ZCN.pdb
: