Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
METSMPEYYEVFGEFRGVLMDKRFTKYWEDVEMFLARPDDLVIATYPKSGTTWISEVVYMIYKEGDVEKCKEDAIFNRIPYLECRNEDLINGIKQLKEKESPRIVKTHLPPKLLPASFWEKNCKMIYLCRNAKDVAVSYYYFLLMITSYPNPKSFSEFVEKFMQGQVPYGSWYDHVKAWWEKSKNSRVLFMFYEDMKEDIRREVVKLIEFLERKPSAELVDRIIQHTSFQEMKNNPSTNYTMMPEEMMNQKVSPFMRKGIIGDWKNHFPEALRERFDEHYKQQMKDCTVKFRMEL
2REO Chain:A ((43-305))
---------------------------------FQAKPDDLILATYPKSGTTWMHEILDMILN---------------------------------------QLIKTHLPSHLIPPSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPDPQNLEEFYEKFMSGKVVGGSWFDHVKGWWAAKDMHRILYLFYEDIKKDPKREIEKILKFLEKDISEEILNKIIYHTSFDVMKQNPMTNYTTLPTSIMDHSISPFMRKGMPGDWKNYFTVAQNEEFDKDYQKKMA-STLTFRTEI
General information:
TITO was launched using:
RESULT:
Template:
2REO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137897 for 1698 contacts (-81.2/contact) +
2D Compatibility (PS) -24439 + (NN) -15317 + (LL) 4992
1D Compatibility (HY) -24400 + (ID) 5800
Total energy: -202861.0 ( -119.47 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2REO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2REO-query.scw
PDB file :
Tito_Scwrl_2REO.pdb
: