Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVVPIRIVGDPVLHTATTPVTVAADGSLPADLAQLIATMYDTMDAANGVGLAANQIGCSLRLFVYDCAADRAMTARRRGVVINPVLETSEIPETMPDPDTDDEGCLSVPGESFPTGRAKWARVTGLDADGSPVSIEGTGLFARMLQHETGHLDGFLYLDRLIGRYARNAKRAVKSHGWGVPGLSWLPGEDPDPFGH
1XEO Chain:A ((1-161))
-SVLQVLHIPDERLRKVAKPVEE-----VNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRD----ERLVLINPELLEKS--GET----GIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1XEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77877 for 1260 contacts (-61.8/contact) +
2D Compatibility (PS) -17378 + (NN) -3918 + (LL) -108
1D Compatibility (HY) -12800 + (ID) 2650
Total energy: -114731.0 ( -91.06 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1XEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XEO-query.scw
PDB file :
Tito_Scwrl_1XEO.pdb
: