Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPWPHENSSLAPWPDLPTLAPNTANTSGLPGVPWEAALAGALLALAVLATVGGNLLVIVAIAWTPRLQTMTNVFVTSLAAADLVMGLLVVPPAATLALTGHWPLGATGCELWTSVDVLCVTASIETLCALAVDRYLAVTNPLRYGALVTKRCARTAVVLVWVVSAAVSFAPIMSQWWRVGADAEAQRCHSNPRCCAFASNMPYVLLSSSVSFYLPLLVMLFVYARVFVVATRQLRLLRGELGRFPPEESPPAPSRSLAPAPVGTCAPPEGVPACGRRPARLLPLREHRALCTLGLIMGTFTLCWLPFFLANVLRALGGPSLVPGPAFLALNWLGYANSAFNPLIYCRSPDFRSAFRRLLC-RCGRRLPPEPCAAARPALFPSGVPAARSSPAQPRLCQRLDGASWGVS |
| 2YCW Chain:B ((9-299)) | ---------------------------------QWEAGMS-LLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWR-DEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIR----KIDR-------------------------------ASKRKRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVF-NRDLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLLAF----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YCW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232700 for 2193 contacts (-106.1/contact) +
2D Compatibility (PS) -31002 + (NN) -19145 + (LL) 2604
1D Compatibility (HY) -42000 + (ID) 8400
Total energy: -330643.0 ( -150.77 by residue)
QMean score : 0.352
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