Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSASNITLTHPTAFLLVGIPGLEHLHIWISIPFCLAYTLALLGNCTLLLIIQADAALHEPMYLFLAMLAAIDLVLSSSALPKMLAIFWFRDREINFFACLAQMFFLHSFSIMESAVLLAMAFDRYVAICKPLHYTKVLTGSLITKIGMAAVARAVTLMTPLPFLLRCFHYCRGPVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAMFIVVLDLLLVILSYIFILQAVLLLASQ-----------------------------------------------------------------------------------------------------------------------------------------------------------------EARYKAFGTCVSHIGAILAFYTTVVISSVMHRVARHA--APHVHILLANFYLLFPPMVNPIIYGVKTKQIRESILGVFPRKDM
3V2Y Chain:A ((61-495))-----------------------NSIKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSGA-TTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITMLK--------NNFRLFLLISACWVISLILGGLPIMGWNCIS-------ALSSCSTVLPL--------YHKHYIL-FCTTVFTLLLLSIVILYCRIYSLVRTRNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL-


General information:
TITO was launched using:
RESULT:

Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -253520 for 1959 contacts (-129.4/contact) +
2D Compatibility (PS) -27451 + (NN) -11266 + (LL) 3200
1D Compatibility (HY) -20800 + (ID) 2400
Total energy: -312237.0 ( -159.39 by residue)
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_3V2Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3V2Y-query.scw
PDB file : Tito_Scwrl_3V2Y.pdb: