Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSLYSEYLNPNKVQEHYNYTKETLETQETTSRQVASAFIVILCCAIVVENLLVLIAVARNSKFHSAMYLFLGNLAASDLLAGVAF-VANTLLSGSVTLRLTPVQWFAR------EGSAFITLSASVFSLLAIAIERHVAIAKVKLYGSD-KSCRMLLLIGASWLISLVLGGLPILGWNCLG---HLEACSTVLPLY------AKHYVLCVVTIFSIILLAIVALYVRIYCVVRSSHADM-----------------AAPQTLALLKTVTIVLGVFIVCWLPAFSILLLDYACPVHSCPILYKAHYFFAVSTLNSLLNPVIYTWRSRDLRREVLRPLQCWRPGVGVQGRRRGGTPGHHLLPLRSSSSLERGMHMPTSPTFLEGNTVV |
| 2Z73 Chain:A ((29-336)) | ---------------------------VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTIS-----CFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILI--IFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLE-WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGE---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -237314 for 2191 contacts (-108.3/contact) +
2D Compatibility (PS) -28082 + (NN) -10821 + (LL) 2440
1D Compatibility (HY) -20000 + (ID) 2650
Total energy: -296427.0 ( -135.29 by residue)
QMean score : 0.244
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