Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MITFLPIIFSILVVVTFVIGNFANGFIALVNS-------TEWVK-----------------RQKISF---------ADQIVTALAVSRVGLLWVLLLNWYSTVLNPAFCSVELRTTAYNIWAVTGHFSNWPATSLSIF---YLLKIANFSNLIFLRLKRRVKSVILVVLLGPLLF---LACHLFVVNMNQIVWTKEYEGNMTWKIKLRRAMYLSDTTVTMLANLV--PFTVTLISFLLLVCSLCKHLKK----MQLHGKGSQDPSTKVHIKVLQTVISFF----LLRAIYFVSVIISVWSFK-NLENKPVFMFCQAIGFSCSSAHPFILI----------WG-NKKLKQTYLSVLWQMRY--------------------------------------------------------------------- |
| 4Z0V Chain:A ((7-440)) | PPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLFRWYKEAKPGAAGSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGHSRELESVCVVEAGP-GTCTFDHRHLYTKKVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRK-SKFSLLSQHDISFYEALESDPLHKELLEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSK-RICVANTHLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEERCNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVTTHQALPSVSHPSDHIALVCDLKWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257974 for 2174 contacts (-118.7/contact) +
2D Compatibility (PS) -31254 + (NN) 349 + (LL) 544
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -302835.0 ( -139.30 by residue)
QMean score : 0.182
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