Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPR--GLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEANDGSLCLAMEYGGEKSLNDLIEERYK-ASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMT-LSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
4AOJ Chain:A ((45-317)) | ---------------------------------LKWELGEGAFGKVFLAECHNLLP---KMLVAVKALKEA-----SESARQDFQREAELLTMLQHQHIVRFFGVCT-EGRPLLMVFEYMRHGDLNRFLRSHGPD--PGPLGLGQLLAVASQVAAGMVYLAG-LHFVHRDLATRNCLVGQG-LVVKIGDFG-----------------TMLPIRWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------------TEAIDCITQGRELERP-RACPPEVYAIM---RGCWQREPQQRHSIKDVHARLQALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81326 for 1857 contacts (-43.8/contact) +
2D Compatibility (PS) -26359 + (NN) -18776 + (LL) 3312
1D Compatibility (HY) -16800 + (ID) 2800
Total energy: -142749.0 ( -76.87 by residue)
QMean score : 0.492
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